laboratory animal science ›› 2015, Vol. 32 ›› Issue (04): 21-25.

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Detection for SNPs of Canine Hip Dysplasia ( CHD) Related Genes in Labrador Retrievers

  

  • Online:2015-08-29 Published:2017-05-08

拉布拉多犬髋关节发育不良相关基因的SNP 位点的检测

  

  1. ( 大连医科大学实验动物中心,大连116044)
  • 基金资助:

    <p>基金项目: 国家自然科学基金( No. 31272392)</p>

Abstract: Abstract: Objective To provide an efficient genetic diagnostics method for Labrador Retrievers,6 SNPs of 5 canine hip dysplasia ( CHD) related genes in genomic DNA of Labrador Retrievers were detected. Method 11 normal and 6 typical CHD Labrador Retrievers were selected by imaging diagnosis. The vein blood was sampled and the genomic DNA was isolated from white blood cells. The PCR/sequencing method was used to analyze the variants of 6 SNPs in 5 canine hip dysplasia ( CHD) related genes ( LAMA2 ( CFA1: 70997779) ,LRR1 ( CFA8: 29247021 ) ,SCR ( CFA24: 28944481 ) ,COL6A3 ( CFA25: 51031100, 51040259 ) , and FN1 ( CFA37: 25095511) ) . Furth more,the association between the SNP variants and CHD was analyzed by Chi-square Test.Result The variants of LAMA2 ( CFA1: 70997779 ) ,LRR1 ( CFA8: 29247021 ) ,SCR ( CFA24: 28944481 ) ,COL6A3 ( CFA25: 51031100) ,and FN1 ( CFA37: 25095511) SNP loci were not significantly associated to CHD ( P > 0. 05) . A/A variants in COL6A3( CFA25: 51040259) SNP locus was significantly associated to CHD ( P = 0. 007) . Conclusion A/A variants in COL6A3 ( CFA25: 51040259) SNP locus might be used as a practical genetic detection index for CHD diagnostics in Labrador Retrievers. However,further confirmation in large-sample is required.

Key words: <p>Labrador Retrievers, CHD,  SNP, genetic diagnostics</p>

摘要: 摘要: 目的检测拉布拉多犬基因组DNA 中与髋关节发育不良密切相关的5 个基因中的6 个SNP 位点,以期为拉布拉多犬的选育提供有效的遗传学诊断方法。方法经影像学诊断,筛选出典型的6 只髋关节发育不良和11 只 正常拉布拉多犬作为实验对象,采取静脉血,提取血细胞的基因组DNA 样本,采用PCR/测序方法对17 个样本的5个基因中的6 个SNP 位点: LAMA2( CFA1: 70997779) ,LRR1( CFA8: 29247021) ,SCR( CFA24: 28944481) ,COL6A3( CFA25: 51031100, 51040259) 和FN1( CFA37: 25095511) 进行变异型检测,并统计分析SNP 位点的变异型与髋关节发育不良犬关联度。结果LAMA2( CFA1: 70997779) ,LRR1( CFA8: 29247021) ,SCR( CFA24: 28944481) ,COL6A3( CFA25: 51031100) 和FN1( CFA37: 25095511) SNP 位点的变异型与拉布拉多犬的髋关节发育不良没有显著相关性( P > 0. 05) 。COL6A3( CFA25: 51040259) SNP 位点的A/A 型与拉布拉多犬的髋关节发育不良存在极显著相关性( P = 0. 007) 。结论COL6A3( CFA25: 51040259) SNP 位点的A/A 型可能成为拉布拉多犬髋关节发育不良的实用性遗传学诊断指标,但尚需大样本确认。

关键词: <, p>, 拉布拉多犬, 髋关节发育不良( CHD) , 单核苷酸多态性( SNP) , 遗传学诊断<, /p>

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