实验动物科学 ›› 2017, Vol. 34 ›› Issue (05): 13-17.

• 研究 论著 • 上一篇    下一篇

鼠脑心肌炎病毒 TaqMan 探针荧光定量RT-PCR 检测方法的建立

  

  1. ( 1. 中国农业科学院上海兽医研究所,上海 200241) ( 2. 扬州大学兽医学院,扬州 225009) ( 3. 上海实验动物研究中心,上海 201203) ( 4. 上海出入境检验检疫局,上海 200135)
  • 出版日期:2017-10-31 发布日期:2017-11-17
  • 基金资助:

    <p>基金项目: 上海市科委实验动物专项资金资助( No. 15140900600)</p>

Establishment of TaqMan Real-time RT-PCR Method to Detect Mice Encephalomyocarditis virus

  • Online:2017-10-31 Published:2017-11-17

摘要: 摘要: 目的 建立快速诊断鼠脑心肌炎病毒感染的荧光定量 RT-PCR 方法。方法 根据鼠脑心肌炎病毒( EMV) PEC9 毒株全基因组序列( GenBank 登录号: DQ288856. 1) ,设计一对特异性引物和 TaqMan 探针,建立 EMV 的 TaqMan 探针荧光定量 RT-PCR 方法,进行条件优化,检测其特异性,敏感性,稳定性。结果 建立的荧光定量 PCR方法,标准曲线的线性关系良好,r 2 值可达 0. 99,敏感性最低检测限为 1 个拷贝数,高于普通 PCR 方法 1000 倍,其特异性强,与其他常见感染的小鼠病毒株均无特异性扩增,批内和批间变异系数均小于 2% 。利用该方法对上海市 120 份小鼠心肌样品进行检测,未检测到阳性感染。结论 本研究为鼠脑心肌炎病毒感染的分子检测,为制定国家标准提供良好的方法。

关键词: <, p>, 鼠脑心肌炎病毒, EMV, TaqMan 探针, 荧光定量 RT-PCR<, /p>

Abstract: Abstract: Objective To develop a real-time RT-PCR assay ( rRT-PCR) for efficient detection of Murine Encephalomyocarditis virus ( EMV) . Method According to the genomic sequences of EMV strain PEC9 ( DQ288856. 1) download from NCBI and to find the conserved sequences. One pair of the specific primers and one TaqMan probe were designed. Then reaction parameters were optimized to develop a real-time RT-PCR assay ( rRTPCR) . Result The method showed a good linear relationship of standard curve with a r 2 value of 0. 99. The sensitivity of the real-time PCR was less than 1 copies /μL. 1 000 times higher than ordinary PCR method ,and its specificity is strong,common mice strains had no specific amplification,between batch and batch of variation coefficient is less than 2% . 120 mice feces samples epidemic materials provided by the Shanghai institute of experimental animals were detected by the real-time PCR. All the 120 mice samples were negative. Conclusion The real-time RT-PCRmethod is good in specificity and sensitivity,which can make a powerful technical support for EMV epidemiological investigation and detection.

Key words: <p>Murine Encephalomyocarditis virus, EMV, TaqMan, real time PCR</p>

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